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  • Top cofit genes for GFF2859 from Variovorax sp. SCN45

    Excinuclease ABC subunit C
    SEED: Excinuclease ABC subunit C
    KEGG: excinuclease ABC subunit C

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2522 Glutaredoxin-related protein no 0.66
    2 GFF7271 Transcriptional regulator, LacI family no 0.64
    3 GFF5973 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.50 0.63
    4 GFF769 Conserved TM helix no 0.63
    5 GFF3338 Threonine efflux protein 0.50 0.63
    6 GFF460 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.62
    7 GFF4304 Cyclohexanecarboxylate--CoA ligase no 0.62
    8 GFF2046 no description no 0.62
    9 GFF6780 Energy-dependent translational throttle protein EttA 0.56 0.62
    10 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.34 0.61
    11 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.36 0.61
    12 GFF5984 L-lactate dehydrogenase 0.56 0.61
    13 GFF4768 Transcriptional regulator, MarR family no 0.61
    14 GFF3867 Translation elongation factor LepA 0.71 0.61
    15 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) 0.64 0.61
    16 GFF6772 L-arabonate dehydratase (EC 4.2.1.25) no 0.60
    17 GFF945 Excinuclease ABC subunit B 0.96 0.60
    18 GFF1680 KEGG: GntR family transcriptional regulator no 0.60
    19 GFF1994 Glutamate carboxypeptidase (EC 3.4.17.11) no 0.60
    20 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.57 0.60

    Or look for negative cofitness