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  • Top cofit genes for GFF2857 from Variovorax sp. SCN45

    Permease of the drug/metabolite transporter (DMT) superfamily
    SEED: Permease of the drug/metabolite transporter (DMT) superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2862 FIG01199081: hypothetical protein no 0.58
    2 GFF2776 hypothetical protein no 0.55
    3 GFF6019 Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2) no 0.54
    4 GFF1634 Ferrichrome-iron receptor no 0.52
    5 GFF4799 hypothetical protein no 0.50
    6 GFF1315 Cyclic di-GMP-binding protein BcsB no 0.48
    7 GFF975 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.14.9) no 0.48
    8 GFF2556 UPF0337 family protein no 0.48
    9 GFF4784 no description no 0.47
    10 GFF3851 Uncharacterized MFS-type transporter no 0.47
    11 GFF1209 hypothetical protein no 0.46
    12 GFF6020 UPF0246 protein YaaA no 0.46
    13 GFF586 Pirin no 0.46
    14 GFF3915 Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain no 0.46
    15 GFF6275 hypothetical protein no 0.46
    16 GFF3893 hypothetical protein no 0.45
    17 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake 0.41 0.45
    18 GFF6090 Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) no 0.45
    19 GFF6299 BUG/TctC family periplasmic protein no 0.44
    20 GFF3844 Transcriptional regulator, LysR family no 0.44

    Or look for negative cofitness