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  • Top cofit genes for GFF2853 from Variovorax sp. SCN45

    DNA-binding protein HU-beta
    SEED: DNA-binding protein HU-beta
    KEGG: DNA-binding protein HU-beta

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1775 no description no 0.50
    2 GFF2050 hypothetical protein 0.33 0.49
    3 GFF4713 Uncharacterized protein YhiN 0.62 0.48
    4 GFF3454 Cys regulon transcriptional activator CysB no 0.48
    5 GFF5602 FIG00348944: hypothetical protein no 0.47
    6 GFF5585 Transcriptional regulator, MarR family no 0.46
    7 GFF4727 Two-component transcriptional response regulator, LuxR family no 0.44
    8 GFF886 Protein of unknown function DUF1446 no 0.44
    9 GFF1658 Transcriptional regulator, LysR family no 0.43
    10 GFF1803 hypothetical protein no 0.43
    11 GFF6377 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.42
    12 GFF4678 FIG00348290: hypothetical protein no 0.42
    13 GFF6680 Aspartate ammonia-lyase (EC 4.3.1.1) no 0.42
    14 GFF719 no description no 0.41
    15 GFF2623 Aspartate aminotransferase no 0.41
    16 GFF191 (Y14336) putative extracellular protein containing predicted 35aa signal peptide no 0.40
    17 GFF4099 Ser/Thr protein phosphatase family protein no 0.40
    18 GFF3739 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) no 0.40
    19 GFF2212 KEGG: prepilin peptidase CpaA no 0.40
    20 GFF7250 Putative transposase InsK for insertion sequence element IS150 no 0.40

    Or look for negative cofitness