Top cofit genes for GFF2842 from Variovorax sp. SCN45

RNA polymerase sigma factor RpoS
SEED: RNA polymerase sigma factor RpoS
KEGG: RNA polymerase nonessential primary-like sigma factor

Rank Hit Name Description Conserved? Cofitness  
1 GFF3692 ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.63
2 GFF2740 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) no 0.62
3 GFF5701 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (EC 5.2.1.8) no 0.60
4 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component no 0.59
5 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) no 0.58
6 GFF401 PhbF no 0.57
7 GFF2144 tRNA-dihydrouridine synthase DusB 0.90 0.57
8 GFF2936 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.57
9 GFF2129 small multidrug resistance family (SMR) protein no 0.56
10 GFF5338 Phospholipid ABC transporter shuttle protein MlaC no 0.56
11 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.54 0.56
12 GFF1276 Sarcosine oxidase no 0.55
13 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) no 0.55
14 GFF4851 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.55
15 GFF2173 no description no 0.55
16 GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) no 0.55
17 GFF982 Cell division protein ZapE no 0.55
18 GFF2357 DNA repair protein RecN no 0.54
19 GFF5675 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.31 0.54
20 GFF3162 Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) no 0.54

Or look for negative cofitness