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  • Top cofit genes for GFF284 from Variovorax sp. SCN45

    putative 2-pyrone-4,6-dicarboxylic acid hydrolase
    SEED: putative 2-pyrone-4,6-dicarboxylic acid hydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5401 2-keto-3-deoxy-L-fuconate dehydrogenase no 0.62
    2 GFF3458 Rubisco activation protein CbbQ no 0.61
    3 GFF7230 Threonine dehydrogenase and related Zn-dependent dehydrogenases no 0.60
    4 GFF182 FIG00347566: hypothetical protein no 0.60
    5 GFF5117 Transcriptional regulator, LysR family no 0.58
    6 GFF6608 hypothetical protein no 0.58
    7 GFF3945 Phosphate transport regulator (distant homolog of PhoU) no 0.57
    8 GFF3149 RND efflux system, inner membrane transporter no 0.57
    9 GFF5870 hypothetical protein no 0.55
    10 GFF5871 hypothetical protein no 0.55
    11 GFF1907 Transcriptional regulator, AraC family no 0.55
    12 GFF2985 BUG/TctC family periplasmic protein no 0.54
    13 GFF1811 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.54
    14 GFF3946 Probable low-affinity inorganic phosphate transporter no 0.53
    15 GFF5356 Aldose 1-epimerase no 0.53
    16 GFF5956 FIG01055484: hypothetical protein no 0.53
    17 GFF1433 hypothetical protein no 0.53
    18 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) no 0.53
    19 GFF504 SAM-dependent methyltransferases no 0.52
    20 GFF6681 TonB-dependent siderophore receptor no 0.52

    Or look for negative cofitness