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  • Top cofit genes for GFF2836 from Variovorax sp. SCN45

    MotA/TolQ/ExbB proton channel family protein
    SEED: MotA/TolQ/ExbB proton channel family protein
    KEGG: biopolymer transport protein ExbB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2835 putative TonB-dependent receptor 0.57 0.97
    2 GFF1119 Ribonuclease HI (EC 3.1.26.4) no 0.93
    3 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) 0.64 0.85
    4 GFF5429 Iron(III) dicitrate transport protein FecA no 0.82
    5 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.52 0.79
    6 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) no 0.77
    7 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.76
    8 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.76
    9 GFF6294 Cell division protein no 0.76
    10 GFF6392 hypothetical protein no 0.75
    11 GFF6036 DNA translocase FtsK no 0.74
    12 GFF2730 DNA topoisomerase IV subunit A (EC 5.99.1.3) no 0.72
    13 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.71
    14 GFF489 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) 0.36 0.70
    15 GFF2734 DNA topoisomerase IV subunit B (EC 5.99.1.3) no 0.70
    16 GFF4015 KEGG: lactoylglutathione lyase no 0.70
    17 GFF5035 Opine oxidase subunit A no 0.69
    18 GFF4396 Mobile element protein no 0.68
    19 GFF1007 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) no 0.67
    20 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 no 0.67

    Or look for negative cofitness