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Cofit
Protein
Homologs
Top cofit genes for GFF2829 from
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Rtn protein
SEED: Rtn protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2627
putative amino acid ABC transporter
no
0.61
2
GFF3032
Putative mannitol dehydrogenase
no
0.60
3
GFF2820
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
0.45
0.56
4
GFF1032
DNA polymerase III psi subunit (EC 2.7.7.7)
no
0.55
5
GFF1809
Putative GTP-binding protein YdgA
no
0.54
6
GFF1074
putative inner membrane protein
no
0.54
7
GFF3862
Deoxycytidine triphosphate deaminase (EC 3.5.4.13)
no
0.54
8
GFF667
Urocanate hydratase (EC 4.2.1.49)
no
0.52
9
GFF471
Putative lacI-family transcriptional regulator
no
0.52
10
GFF4208
FIG01046757: hypothetical protein
no
0.52
11
GFF3047
Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-)
no
0.52
12
GFF1433
Putative inner membrane or exported protein
no
0.51
13
GFF1366
putative cytoplasmic protein
no
0.51
14
GFF2735
Acyl-CoA thioesterase YciA, involved in membrane biogenesis
no
0.51
15
GFF1227
Putative diguanylate cyclase/phosphodiesterase
no
0.51
16
GFF1803
Exoenzymes regulatory protein AepA precursor
0.32
0.50
17
GFF2743
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
no
0.49
18
GFF1085
YaaH protein
no
0.49
19
GFF2257
hypothetical protein
no
0.49
20
GFF422
Putative sugar kinase
no
0.49
Or look for
negative cofitness