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  • Top cofit genes for GFF2828 from Variovorax sp. SCN45

    Uncharacterized protein CC_3059
    SEED: FIG019175: putative membrane protein
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6216 hypothetical protein no 0.60
    2 GFF1882 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit (EC 1.2.7.-) no 0.60
    3 GFF5064 Exonuclease SbcC no 0.60
    4 GFF5705 Transcriptional regulator, AcrR family no 0.58
    5 GFF6562 T1SS secreted agglutinin RTX no 0.56
    6 GFF2225 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.56
    7 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.56
    8 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) no 0.55
    9 GFF5957 Uncharacterized MFS-type transporter no 0.55
    10 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.55
    11 GFF4676 hypothetical protein no 0.55
    12 GFF5868 hypothetical protein no 0.54
    13 GFF4786 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.54
    14 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) no 0.53
    15 GFF6860 Epoxide hydrolase (EC 3.3.2.9) no 0.53
    16 GFF5028 hypothetical protein no 0.53
    17 GFF5668 Uncharacterized MFS-type transporter no 0.53
    18 GFF5684 3-ketoacyl-CoA thiolase (EC 2.3.1.16) no 0.53
    19 GFF7374 FIG00984748: hypothetical protein no 0.52
    20 GFF5869 internalin, putative no 0.52

    Or look for negative cofitness