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  • Top cofit genes for PS417_14425 from Pseudomonas simiae WCS417

    alkylhydroperoxidase
    SEED: Macrophage infectivity potentiator-related protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08130 aspartate aminotransferase no 0.23
    2 PS417_16995 LysR family transcriptional regulator 0.38 0.21
    3 PS417_04025 glycine/betaine ABC transporter permease 0.63 0.21
    4 PS417_18885 GntR family transcriptional regulator no 0.20
    5 PS417_05935 polyamine ABC transporter ATP-binding protein no 0.20
    6 PS417_12910 alanine racemase no 0.20
    7 PS417_17505 LuxR family transcriptional regulator no 0.19
    8 PS417_08930 hypothetical protein no 0.19
    9 PS417_00035 hypothetical protein no 0.19
    10 PS417_15450 ABC transporter permease 0.35 0.19
    11 PS417_12900 Fe-S protein no 0.19
    12 PS417_25110 capsular biosynthesis protein no 0.18
    13 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) 0.19 0.18
    14 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase no 0.18
    15 PS417_00355 metal ABC transporter permease no 0.18
    16 PS417_26980 hypothetical protein no 0.18
    17 PS417_18950 3-dehydroquinate dehydratase no 0.18
    18 PS417_03155 transcriptional regulator no 0.18
    19 PS417_27250 glycine cleavage system protein H 0.28 0.18
    20 PS417_15665 hypothetical protein no 0.18

    Or look for negative cofitness