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Cofit
Protein
Homologs
Top cofit genes for GFF2817 from
Variovorax sp. SCN45
Probable proline-rich protein
SEED: Probable proline-rich protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5856
Outer membrane receptor proteins, likely involved in siderophore uptake
no
0.73
2
GFF7373
CaiB/BaiF family protein
0.46
0.63
3
GFF6269
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
0.22
0.63
4
GFF4397
hypothetical protein
no
0.59
5
GFF5020
Tripartite tricarboxylate transporter TctB family
no
0.59
6
GFF7371
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)
no
0.59
7
GFF4417
Conjugative transfer protein TrbE
no
0.59
8
GFF2504
Cell division protein ZapD
0.29
0.58
9
GFF3915
Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
no
0.58
10
GFF5774
RNA polymerase sigma factor for flagellar operon
no
0.57
11
GFF7375
Arginine:pyruvate transaminase
no
0.57
12
GFF6390
GtrA-like protein
no
0.56
13
GFF250
Homoserine/homoserine lactone efflux protein
no
0.56
14
GFF6049
Acyl-CoA dehydrogenase family protein
no
0.56
15
GFF5021
Tripartite tricarboxylate transporter TctA family
no
0.56
16
GFF5518
Nudix hydrolase family protein KPN_02621
no
0.56
17
GFF3906
Acyl-CoA dehydrogenase
no
0.55
18
GFF4426
Homolog of eukaryotic DNA ligase III
no
0.55
19
GFF5307
Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241)
no
0.54
20
GFF312
FIG021862: membrane protein, exporter
no
0.54
Or look for
negative cofitness