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Cofit
Protein
Homologs
Top cofit genes for PS417_14355 from
Pseudomonas simiae WCS417
sugar dehydrogenase
SEED: short chain dehydrogenase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_21150
HAD family hydrolase
0.38
0.23
2
PS417
_05005
penicillin-binding protein
no
0.18
3
PS417
_07830
transposase
no
0.17
4
PS417
_04920
GntR family transcriptional regulator
no
0.17
5
PS417
_23005
XRE family transcriptional regulator
no
0.17
6
PS417
_10015
hypothetical protein
no
0.17
7
PS417
_23630
NADPH quinone reductase MdaB
no
0.17
8
PS417
_20310
hypothetical protein
no
0.16
9
PS417
_26445
ArsR family transcriptional regulator
no
0.16
10
PS417
_13050
N-acetylglucosamine-6-sulfatase
no
0.16
11
PS417
_25035
hypothetical protein
no
0.16
12
PS417
_22340
carbamate kinase
0.21
0.16
13
PS417
_25010
fimbrial assembly protein
no
0.16
14
PS417
_10960
quinate dehydrogenase
no
0.16
15
PS417
_07245
2-deoxy-D-ribonate 3-dehydrogenase
(from data)
no
0.16
16
PS417
_03285
chromosome partitioning protein
no
0.16
17
PS417
_27410
outer membrane usher protein
no
0.15
18
PS417
_26390
acyltransferase
0.23
0.15
19
PS417
_00030
hypothetical protein
no
0.15
20
PS417
_17845
3,4-dihydroxyphenylacetate 2,3-dioxygenase
no
0.15
Or look for
negative cofitness