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  • Top cofit genes for GFF2809 from Variovorax sp. SCN45

    Putative transcription regulator
    SEED: Probable transcription regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3109 Methionine ABC transporter substrate-binding protein no 0.53
    2 GFF458 Aldoxime dehydratase no 0.52
    3 GFF1358 Transcriptional regulator, LysR family no 0.50
    4 GFF6852 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.50
    5 GFF89 hypothetical protein no 0.49
    6 GFF6980 Mobile element protein 0.22 0.49
    7 GFF3948 Acetyltransferase, GNAT family no 0.48
    8 GFF4917 no description no 0.47
    9 GFF1348 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.46
    10 GFF941 Transporter, LysE family no 0.46
    11 GFF3143 hypothetical protein no 0.46
    12 GFF5863 Ferrichrome-iron receptor no 0.46
    13 GFF6598 Putative formate dehydrogenase oxidoreductase protein no 0.46
    14 GFF4166 Cytidine deaminase (EC 3.5.4.5) no 0.45
    15 GFF5776 Gluconokinase (EC 2.7.1.12) no 0.45
    16 GFF4429 Inner membrane protein YpjD 0.26 0.45
    17 GFF2840 Integral membrane protein, interacts with FtsH no 0.44
    18 GFF2004 no description no 0.44
    19 GFF2395 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) no 0.44
    20 GFF6220 hypothetical protein no 0.44

    Or look for negative cofitness