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  • Top cofit genes for PS417_14305 from Pseudomonas simiae WCS417

    hydroxyproline-2-epimerase
    SEED: 4-hydroxyproline epimerase (EC 5.1.1.8)
    KEGG: 4-hydroxyproline epimerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_28190 amino acid ABC transporter substrate-binding protein no 0.27
    2 PS417_22445 ATP-dependent DNA helicase RuvB 0.25 0.24
    3 PS417_18375 hypothetical protein no 0.22
    4 PS417_18775 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase no 0.22
    5 PS417_12730 glycosyltransferase no 0.21
    6 PS417_10010 Replication protein P no 0.21
    7 PS417_15490 glutamine ABC transporter ATP-binding protein no 0.21
    8 PS417_12310 methionine synthase 0.37 0.21
    9 PS417_05925 spermidine/putrescine ABC transporter permease no 0.20
    10 PS417_08940 thioesterase no 0.20
    11 PS417_14020 diguanylate phosphodiesterase no 0.19
    12 PS417_19630 LuxR family transcriptional regulator no 0.19
    13 PS417_11335 AsnC family transcriptional regulator no 0.19
    14 PS417_25390 MFS transporter no 0.19
    15 PS417_01975 pilus assembly protein PilQ no 0.19
    16 PS417_06045 membrane protein 0.78 0.19
    17 PS417_16235 ABC transporter ATP-binding protein no 0.19
    18 PS417_04285 protease TldD no 0.18
    19 PS417_07110 hypothetical protein no 0.18
    20 PS417_07585 hypothetical protein no 0.18

    Or look for negative cofitness