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  • Top cofit genes for PS417_01425 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator
    SEED: transcriptional regulator, AraC family
    KEGG: AraC family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_15630 DeoR faimly transcriptional regulator no 0.19
    2 PS417_02075 thioesterase no 0.19
    3 PS417_20605 hypothetical protein no 0.17
    4 PS417_23005 XRE family transcriptional regulator no 0.17
    5 PS417_11195 NAD(P)H-quinone oxidoreductase 0.39 0.17
    6 PS417_05330 fimbrial assembly protein no 0.16
    7 PS417_26320 ABC transporter permease no 0.16
    8 PS417_04805 poly(beta-D-mannuronate) O-acetylase no 0.16
    9 PS417_24085 protein RnfH no 0.15
    10 PS417_00230 aminopeptidase no 0.15
    11 PS417_14100 alpha-ketoglutarate-dependent dioxygenase 0.40 0.15
    12 PS417_26125 glutathione S-transferase no 0.15
    13 PS417_26395 hypothetical protein no 0.15
    14 PS417_05410 membrane protein 0.17 0.15
    15 PS417_03345 type I secretion protein TolC 0.45 0.15
    16 PS417_10210 hypothetical protein no 0.15
    17 PS417_20550 hypothetical protein no 0.15
    18 PS417_15570 excinuclease ABC subunit A no 0.15
    19 PS417_27240 hypothetical protein no 0.14
    20 PS417_22330 arginine deiminase 0.19 0.14

    Or look for negative cofitness