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  • Top cofit genes for PS417_00145 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25060 O-antigen polymerase no 0.22
    2 PS417_15025 aminoglycoside phosphotransferase no 0.22
    3 PS417_11840 GntR family transcriptional regulator no 0.22
    4 PS417_10135 phage tail protein no 0.21
    5 PS417_09125 (Fe-S)-binding protein no 0.20
    6 PS417_27605 hypothetical protein 0.34 0.20
    7 PS417_22165 LysR family transcriptional regulator no 0.20
    8 PS417_09925 hypothetical protein no 0.20
    9 PS417_13595 XRE family transcriptional regulator no 0.19
    10 PS417_19265 membrane protein no 0.19
    11 PS417_27610 hypothetical protein 0.12 0.19
    12 PS417_16655 N-hydroxyarylamine O-acetyltransferase no 0.19
    13 PS417_28355 cardiolipin synthetase no 0.18
    14 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) 0.15 0.18
    15 PS417_11845 RpiR family transcriptional regulator no 0.18
    16 PS417_15190 acyl-CoA dehydrogenase no 0.18
    17 PS417_10815 TetR family transcriptional regulator no 0.18
    18 PS417_17055 transporter 0.19 0.18
    19 PS417_14080 hypothetical protein 0.33 0.18
    20 PS417_01180 ribosomal protein S6 modification protein 0.33 0.17

    Or look for negative cofitness