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  • Top cofit genes for GFF2793 from Variovorax sp. SCN45

    Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) no 0.67
    2 GFF4817 Hydroxymethylpyrimidine ABC transporter, ATPase component no 0.57
    3 GFF7216 hypothetical protein no 0.54
    4 GFF3804 BUG/TctC family periplasmic protein 0.30 0.54
    5 GFF5354 C4-dicarboxylate transport protein no 0.52
    6 GFF4262 hypothetical protein no 0.52
    7 GFF942 Iron-sulfur cluster-binding protein no 0.52
    8 GFF6996 Flagellar hook-basal body complex protein FliE no 0.51
    9 GFF1669 hypothetical protein no 0.50
    10 GFF1668 BUG/TctC family periplasmic protein no 0.49
    11 GFF543 Uncharacterized deacetylase PA5390 no 0.49
    12 GFF6726 hypothetical protein no 0.49
    13 GFF6175 hypothetical protein no 0.48
    14 GFF582 Two-component system sensor histidine kinase no 0.47
    15 GFF5000 PUTATIVE ZINC PROTEASE PROTEIN no 0.47
    16 GFF6658 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) no 0.47
    17 GFF492 no description no 0.46
    18 GFF3904 Probable signal peptide protein no 0.46
    19 GFF6261 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG (EC 2.7.8.37) no 0.46
    20 GFF3610 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.45

    Or look for negative cofitness