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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF279 from
Variovorax sp. SCN45
Uncharacterized MFS-type transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4737
Nitrate ABC transporter, substrate-binding protein
no
0.55
2
GFF149
Acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase 40 kDa form (EC 2.3.1.164)
no
0.45
3
GFF609
hypothetical protein
no
0.44
4
GFF1229
4-hydroxybutyrate coenzyme A transferase
no
0.43
5
GFF3972
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.43
6
GFF5338
Phospholipid ABC transporter shuttle protein MlaC
no
0.43
7
GFF5961
Acetyltransferase
no
0.43
8
GFF928
tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91)
0.34
0.43
9
GFF7352
1,2-phenylacetyl-CoA epoxidase, subunit D (EC 1.14.13.149)
no
0.42
10
GFF7228
Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
no
0.42
11
GFF2685
DNA internalization-related competence protein ComEC/Rec2
no
0.42
12
GFF5115
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
no
0.41
13
GFF5105
Transcriptional regulator, MerR family
no
0.41
14
GFF2144
tRNA-dihydrouridine synthase DusB
no
0.40
15
GFF4568
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
no
0.40
16
GFF6374
predicted 2-keto-3-deoxyxylonate dehydratase
no
0.40
17
GFF2326
Transcriptional regulator, LysR family
no
0.40
18
GFF5373
Xylose isomerase-like TIM-barrel protein KPN_00539
no
0.40
19
GFF722
hypothetical protein
no
0.40
20
GFF3115
Methionine ABC transporter substrate-binding protein
0.44
0.39
Or look for
negative cofitness