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  • Top cofit genes for GFF2785 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2151 twitching motility protein PilG no 0.61
    2 GFF4432 Two-component system response regulator protein no 0.60
    3 GFF2154 twitching motility protein PilJ no 0.60
    4 GFF4556 hypothetical protein no 0.59
    5 GFF5323 Type IV pilus biogenesis protein PilQ no 0.59
    6 GFF2509 Type IV fimbrial assembly protein PilC no 0.59
    7 GFF5415 Type IV fimbrial biogenesis protein PilV no 0.59
    8 GFF993 Type IV pilus biogenesis protein PilF no 0.59
    9 GFF5419 Type IV pilus biogenesis protein PilE no 0.59
    10 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.58
    11 GFF5417 hypothetical protein no 0.58
    12 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) no 0.58
    13 GFF33 Type IV pilus biogenesis protein PilZ no 0.58
    14 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) no 0.58
    15 GFF5490 Uncharacterized protein with LysM domain, COG1652 no 0.58
    16 GFF3068 FIG00538108: hypothetical protein no 0.58
    17 GFF3886 Putative transmembrane protein no 0.58
    18 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.58
    19 GFF5319 Type IV pilus biogenesis protein PilM no 0.57
    20 GFF5321 Type IV pilus biogenesis protein PilO no 0.57

    Or look for negative cofitness