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  • Top cofit genes for GFF2778 from Variovorax sp. SCN45

    Fosmidomycin resistance protein
    SEED: Fosmidomycin resistance protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2884 Pyruvate:Oxaloacetate transcarboxylase domain protein 0.25 0.61
    2 GFF234 Protein QmcA (possibly involved in integral membrane quality control) no 0.58
    3 GFF4268 Uncharacterized MFS-type transporter 0.23 0.55
    4 GFF153 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.54
    5 GFF402 hypothetical protein no 0.52
    6 GFF1397 TRAP-type C4-dicarboxylate transport system, large permease component no 0.51
    7 GFF2132 Thiol:disulfide interchange protein DsbC no 0.51
    8 GFF6146 Phosphonoacetate hydrolase (EC 3.11.1.2) no 0.51
    9 GFF622 BUG/TctC family periplasmic protein no 0.51
    10 GFF2839 Protein GlcG no 0.51
    11 GFF3031 hypothetical protein no 0.51
    12 GFF2790 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.50
    13 GFF5848 Flagellar motor protein no 0.50
    14 GFF3992 HNH endonuclease family protein no 0.49
    15 GFF844 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.49
    16 GFF5774 RNA polymerase sigma factor for flagellar operon no 0.49
    17 GFF898 putative oxygenase subunit no 0.48
    18 GFF3285 ATP-dependent Clp protease ATP-binding subunit ClpA no 0.48
    19 GFF815 COGs COG3777 no 0.48
    20 GFF2521 FIG00931781: hypothetical protein 0.38 0.47

    Or look for negative cofitness