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  • Top cofit genes for GFF2777 from Variovorax sp. SCN45

    Uncharacterized UPF0721 integral membrane protein
    SEED: putative inner membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF913 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.55
    2 GFF4776 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.53
    3 GFF2617 no description no 0.50
    4 GFF5101 Dihydroxy-acid dehydratase (EC 4.2.1.9) no 0.50
    5 GFF3460 Urea ABC transporter, ATPase protein UrtE no 0.50
    6 GFF1438 no description no 0.48
    7 GFF3354 FIG00537998: hypothetical protein no 0.47
    8 GFF6849 MotA/TolQ/ExbB proton channel family protein no 0.47
    9 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) no 0.46
    10 GFF6298 Transcriptional regulator, LysR family no 0.46
    11 GFF5897 hypothetical protein no 0.45
    12 GFF7270 Altronate dehydratase (EC 4.2.1.7) no 0.45
    13 GFF2398 Uncharacterized MFS-type transporter no 0.45
    14 GFF4665 no description no 0.44
    15 GFF4594 Aspartate ammonia-lyase (EC 4.3.1.1) no 0.44
    16 GFF3027 T6SS component TssK (ImpJ/VasE) no 0.44
    17 GFF1115 Putative transmembrane protein no 0.43
    18 GFF1332 no description no 0.43
    19 GFF2101 no description no 0.43
    20 GFF583 Tripartite tricarboxylate transporter TctB family no 0.43

    Or look for negative cofitness