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  • Top cofit genes for GFF2768 from Variovorax sp. SCN45

    3-ketoacyl-CoA thiolase 2 [fadN-fadA-fadE operon] (EC 2.3.1.16)
    SEED: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
    KEGG: acetyl-CoA acyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2228 glycerophosphoryl diester phosphodiesterase no 0.56
    2 GFF1603 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.52
    3 GFF6912 L-sorbosone dehydrogenase 0.54 0.50
    4 GFF6923 Acetate permease ActP (cation/acetate symporter) 0.69 0.50
    5 GFF466 hypothetical protein no 0.50
    6 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.50
    7 GFF2405 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.50
    8 GFF1657 Nitronate monooxygenase (EC 1.13.12.16) no 0.48
    9 GFF5825 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.47
    10 GFF6148 hypothetical protein no 0.47
    11 GFF2333 hypothetical protein no 0.45
    12 GFF558 hypothetical protein no 0.45
    13 GFF4705 Monooxygenase, flavin-binding family no 0.45
    14 GFF5849 FIG01210206: hypothetical protein no 0.45
    15 GFF4267 Transcriptional regulator, AraC family no 0.44
    16 GFF4928 hypothetical protein no 0.44
    17 GFF590 Transcriptional regulator, LysR family no 0.44
    18 GFF3796 putative lipoprotein no 0.43
    19 GFF1318 hypothetical protein no 0.43
    20 GFF5995 LysR family transcriptional regulator STM3121 0.34 0.43

    Or look for negative cofitness