• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_14100 from Pseudomonas simiae WCS417

    alpha-ketoglutarate-dependent dioxygenase
    SEED: Alkylated DNA repair protein AlkB
    KEGG: alkylated DNA repair protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_18205 aldehyde dehydrogenase 0.50 0.21
    2 PS417_26950 LysR family transcriptional regulator no 0.20
    3 PS417_19155 DSBA oxidoreductase 0.30 0.20
    4 PS417_19970 recombinase RmuC no 0.20
    5 PS417_17605 amino acid transporter no 0.19
    6 PS417_01820 chemotaxis protein no 0.19
    7 PS417_10200 hypothetical protein no 0.18
    8 PS417_12895 pyruvate dehydrogenase no 0.18
    9 PS417_09615 glycosyl transferase family 1 0.29 0.18
    10 PS417_21600 pilus assembly protein PilZ no 0.18
    11 PS417_18860 transcriptional regulator no 0.18
    12 PS417_02465 carbohydrate kinase no 0.17
    13 PS417_15560 hypothetical protein no 0.17
    14 PS417_12095 ABC transporter substrate-binding protein no 0.17
    15 PS417_05780 hypothetical protein no 0.17
    16 PS417_10840 amidase no 0.17
    17 PS417_05250 hypothetical protein no 0.17
    18 PS417_09590 membrane protein no 0.17
    19 PS417_10265 peptidase no 0.17
    20 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein 0.35 0.17

    Or look for negative cofitness