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  • Top cofit genes for GFF2762 from Variovorax sp. SCN45

    Glutamine ABC transporter, substrate-binding protein GlnH
    SEED: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
    KEGG: glutamine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2953 Transcriptional regulator, AraC family no 0.54
    2 GFF6163 hypothetical protein 0.26 0.52
    3 GFF3954 Similar to cobalamin biosynthesis protein CbiB no 0.51
    4 GFF2665 FIG001454: Transglutaminase-like enzymes, putative cysteine proteases no 0.50
    5 GFF7412 no description no 0.49
    6 GFF2982 Histone acetyltransferase HPA2 and related acetyltransferases no 0.47
    7 GFF2957 UPF0192 protein YfaS no 0.46
    8 GFF5728 Methyl-accepting chemotaxis sensor/transducer protein no 0.46
    9 GFF6072 Transcriptional regulator, LysR family no 0.46
    10 GFF6549 no description no 0.44
    11 GFF325 Nucleoside ABC transporter, substrate-binding protein no 0.44
    12 GFF1267 Probable lipoprotein signal peptide no 0.43
    13 GFF2647 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.43
    14 GFF4378 HYPOTHETICAL/UNKNOWN PROTEIN no 0.41
    15 GFF943 Intracellular PHB depolymerase no 0.41
    16 GFF7314 no description no 0.41
    17 GFF4913 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.40
    18 GFF3272 Inner membrane protein, KefB/KefC family no 0.40
    19 GFF768 Trehalose synthase (EC 5.4.99.16) no 0.40
    20 GFF280 BUG/TctC family periplasmic protein no 0.40

    Or look for negative cofitness