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  • Top cofit genes for GFF2758 from Variovorax sp. SCN45

    Transcriptional regulator, RpiR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4808 6,7-dimethyl-8-ribityllumazine synthase paralog no 0.45
    2 GFF6086 Putative short-chain dehydrogenase no 0.45
    3 GFF3266 Putative transmembrane protein no 0.45
    4 GFF971 NLP/P60 protein no 0.45
    5 GFF2765 FIG00005326: uncharacterized protein no 0.44
    6 GFF4379 y4eB gene in pNGR234a homolog no 0.44
    7 GFF2527 GCN5-related N-acetyltransferase no 0.44
    8 GFF1145 hypothetical protein no 0.43
    9 GFF3244 Spermidine synthase N-terminal extension / Spermidine synthase (EC 2.5.1.16) no 0.41
    10 GFF6973 Mobile element protein no 0.41
    11 GFF3911 Putative phosphoesterase no 0.41
    12 GFF3852 Tetrapyrrole methylase family protein no 0.40
    13 GFF5829 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.40
    14 GFF3935 RNA polymerase ECF-type sigma factor no 0.40
    15 GFF3284 hypothetical protein no 0.40
    16 GFF6072 Transcriptional regulator, LysR family no 0.40
    17 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.40
    18 GFF3563 L-carnitine dehydratase/bile acid-inducible protein F no 0.39
    19 GFF3249 Guanyl-specific ribonuclease (EC 3.1.27.3) no 0.39
    20 GFF5382 BUG/TctC family periplasmic protein no 0.39

    Or look for negative cofitness