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  • Top cofit genes for PS417_14015 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: LysR family transcriptional regulator STM2281

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01550 cell envelope biogenesis protein AsmA no 0.24
    2 PS417_22270 hypothetical protein no 0.24
    3 PS417_02555 exoribonuclease R no 0.23
    4 PS417_21280 membrane protein 0.30 0.23
    5 PS417_00665 RND transporter no 0.22
    6 PS417_22765 InaA protein no 0.22
    7 PS417_24780 peptidase C13 0.11 0.22
    8 PS417_07510 aspartyl beta-hydroxylase no 0.21
    9 PS417_26255 hypothetical protein no 0.21
    10 PS417_23900 poly(A) polymerase no 0.21
    11 PS417_25775 lipoprotein no 0.21
    12 PS417_14395 fe2+ zn2+ uptake regulation protein no 0.21
    13 PS417_25405 catalase 0.30 0.20
    14 PS417_20955 secretion protein 0.32 0.20
    15 PS417_09490 quinone oxidoreductase no 0.20
    16 PS417_03625 lipid A 3-O-deacylase 0.40 0.20
    17 PS417_06020 membrane protein no 0.20
    18 PS417_15075 NAD-glutamate dehydrogenase no 0.20
    19 PS417_27295 hypothetical protein no 0.20
    20 PS417_06775 antibiotic transporter no 0.20

    Or look for negative cofitness