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  • Top cofit genes for PS417_13990 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04995 glutathione S-transferase no 0.25
    2 PS417_15570 excinuclease ABC subunit A 0.59 0.24
    3 PS417_05035 hypothetical protein no 0.24
    4 PS417_23635 membrane protein no 0.24
    5 PS417_16070 TonB-dependent receptor no 0.24
    6 PS417_21040 sulfurylase 0.13 0.24
    7 PS417_19145 membrane protein no 0.24
    8 PS417_09900 hypothetical protein no 0.23
    9 PS417_21050 serine acetyltransferase no 0.23
    10 PS417_13980 MFS transporter permease 0.37 0.22
    11 PS417_12610 RNA polymerase sigma factor no 0.22
    12 PS417_06970 LysR family transcriptional regulator no 0.22
    13 PS417_00620 GntR family transcriptional regulator no 0.22
    14 PS417_06365 RNA polymerase sigma factor no 0.22
    15 PS417_06010 TetR family transcriptional regulator no 0.21
    16 PS417_05975 chemotaxis protein CheW no 0.20
    17 PS417_01200 phosphoesterase no 0.20
    18 PS417_22000 glutathione S-transferase 0.12 0.20
    19 PS417_05985 chemotaxis protein CheY no 0.20
    20 PS417_13425 cupin no 0.20

    Or look for negative cofitness