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Cofit
Protein
Homologs
Top cofit genes for GFF2740 from
Hydrogenophaga sp. GW460-11-11-14-LB1
Ammonia monooxygenase
SEED: Ammonia monooxygenase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4831
Transcriptional regulator, AraC family
no
0.53
2
GFF4610
hypothetical protein
no
0.52
3
GFF4408
CaiB/BaiF family protein
no
0.51
4
GFF1510
Oxidoreductase (EC 1.1.1.-)
no
0.49
5
GFF5165
Type IV fimbrial biogenesis protein PilY1
no
0.47
6
GFF2603
NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)
no
0.46
7
GFF5422
ABC transporter, ATP-binding protein
no
0.46
8
GFF3485
Plasmid replication initiator protein
no
0.46
9
GFF3209
cell filamentation protein
no
0.46
10
GFF3244
Rhodanese-related sulfurtransferases
no
0.46
11
GFF2776
Transcriptional regulator, IclR family
no
0.46
12
GFF4781
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
no
0.46
13
GFF1874
Mannose-6-phosphate isomerase
no
0.45
14
GFF905
hypothetical protein
no
0.45
15
GFF3721
Fumarylacetoacetate hydrolase family protein
no
0.45
16
GFF4299
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation
no
0.45
17
GFF2766
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)
no
0.44
18
GFF5358
Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16)
0.26
0.44
19
GFF5685
RND efflux system, inner membrane transporter CmeB
no
0.44
20
GFF5548
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
no
0.44
Or look for
negative cofitness