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  • Top cofit genes for GFF2739 from Variovorax sp. SCN45

    Putative SAM-dependent methyltransferase Bucepa02006346
    SEED: Putative SAM-dependent methyltransferase Bucepa02006346

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.63
    2 GFF4776 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.58
    3 GFF50 Murein hydrolase activator NlpD no 0.56
    4 GFF6838 BUG/TctC family periplasmic protein no 0.53
    5 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) no 0.53
    6 GFF6687 hypothetical protein no 0.53
    7 GFF6373 T6SS component TssA (ImpA) no 0.52
    8 GFF685 Tricarboxylate transport protein TctC no 0.52
    9 GFF378 RNA (nucleoside 2'-O)-methyltransferase no 0.51
    10 GFF536 no description no 0.50
    11 GFF4868 Type IV secretory pathway, VirD2 components (relaxase) no 0.50
    12 GFF286 Transcriptional regulator, LysR family no 0.50
    13 GFF1971 Creatinine amidohydrolase (EC 3.5.2.10) no 0.50
    14 GFF4911 Nudix-like NDP and NTP phosphohydrolase NudJ no 0.50
    15 GFF3450 Transcriptional regulator, LacI family no 0.50
    16 GFF25 Alcohol dehydrogenase (EC 1.1.1.1) no 0.50
    17 GFF2415 Trans-aconitate 2-methyltransferase (EC 2.1.1.144) 0.36 0.50
    18 GFF3633 hypothetical protein no 0.50
    19 GFF674 no description no 0.49
    20 GFF3932 Acetyltransferase, GNAT family no 0.49

    Or look for negative cofitness