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  • Top cofit genes for GFF2735 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF757 hypothetical protein no 0.58
    2 GFF2270 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein no 0.54
    3 GFF4130 Amidase family protein SACE_5032 no 0.52
    4 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO no 0.49
    5 GFF2430 Protein secretion chaperonin CsaA no 0.49
    6 GFF3373 Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) no 0.49
    7 GFF4614 Transcriptional regulator, AraC family no 0.49
    8 GFF6071 Putative exported protein clustered with Gamma-glutamyltranspeptidase no 0.48
    9 GFF5737 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) no 0.48
    10 GFF3609 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    11 GFF7167 Pirin no 0.47
    12 GFF3224 no description no 0.45
    13 GFF4168 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.45
    14 GFF4506 hypothetical protein no 0.45
    15 GFF261 no description no 0.45
    16 GFF6446 Xaa-Pro aminopeptidase (EC 3.4.11.9) no 0.44
    17 GFF6814 NADH dehydrogenase (EC 1.6.99.3) no 0.43
    18 GFF1085 no description no 0.43
    19 GFF2024 L-lysine permease no 0.43
    20 GFF773 hypothetical protein no 0.43

    Or look for negative cofitness