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  • Top cofit genes for PS417_13940 from Pseudomonas simiae WCS417

    racemase
    SEED: Aspartate racemase (EC 5.1.1.13)
    KEGG: aspartate racemase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16370 chemotaxis protein CheY 0.47 0.69
    2 PS417_10720 chemotaxis protein CheY 0.36 0.68
    3 PS417_06365 RNA polymerase sigma factor no 0.67
    4 PS417_16160 ABC transporter substrate-binding protein no 0.63
    5 PS417_06970 LysR family transcriptional regulator no 0.62
    6 PS417_16070 TonB-dependent receptor 0.70 0.61
    7 PS417_28265 pyridoxamine kinase no 0.61
    8 PS417_19560 amino acid ABC transporter substrate-binding protein no 0.58
    9 PS417_13425 cupin 0.38 0.58
    10 PS417_03725 acyltransferase no 0.57
    11 PS417_09665 dimethylglycine dehydrogenase 0.33 0.55
    12 PS417_05070 serine/threonine protein kinase 0.30 0.53
    13 PS417_23950 polynucleotide phosphorylase/polyadenylase 0.17 0.53
    14 PS417_21045 cysteine synthase no 0.53
    15 PS417_21040 sulfurylase no 0.52
    16 PS417_24885 transcriptional regulator no 0.52
    17 PS417_24605 thiamine-phosphate pyrophosphorylase 0.69 0.51
    18 PS417_12610 RNA polymerase sigma factor no 0.50
    19 PS417_21050 serine acetyltransferase no 0.50
    20 PS417_12550 chemotaxis protein no 0.50

    Or look for negative cofitness