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  • Top cofit genes for GFF2727 from Variovorax sp. SCN45

    Outer membrane protein romA
    SEED: Outer membrane protein romA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF582 Two-component system sensor histidine kinase no 0.59
    2 GFF2243 Ornithine cyclodeaminase (EC 4.3.1.12) no 0.58
    3 GFF759 FIG01121861: hypothetical protein no 0.56
    4 GFF134 putative oxidoreductase (AsfA-like), putative L-aspartate oxidase( EC:1.4.3.16 ) no 0.56
    5 GFF3724 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.55
    6 GFF1734 no description no 0.55
    7 GFF2341 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.54
    8 GFF1468 Transcriptional regulator, GntR family no 0.54
    9 GFF2468 Outer membrane protein assembly factor YaeT no 0.54
    10 GFF3227 no description no 0.53
    11 GFF1587 no description no 0.52
    12 GFF3752 KEGG: catechol 2,3-dioxygenase no 0.51
    13 GFF1873 KEGG: LacI family transcriptional regulator no 0.51
    14 GFF5593 no description no 0.51
    15 GFF6016 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.51
    16 GFF2149 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) no 0.50
    17 GFF2164 Transcriptional regulator, IclR family 0.25 0.50
    18 GFF1239 Two-component system sensor histidine kinase no 0.50
    19 GFF2561 FIG00931134: hypothetical protein no 0.49
    20 GFF2618 no description no 0.49

    Or look for negative cofitness