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  • Top cofit genes for GFF2717 from Variovorax sp. SCN45

    Epimerase KguE
    SEED: Epimerase KguE

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4695 Molybdopterin adenylyltransferase (EC 2.7.7.75) no 0.57
    2 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no 0.56
    3 GFF7029 hypothetical protein no 0.54
    4 GFF2453 NAD-dependent dihydropyrimidine dehydrogenase subunit PreT (EC 1.3.1.1) no 0.54
    5 GFF5593 no description 0.27 0.54
    6 GFF654 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.53
    7 GFF2671 Domain of unknown function / Efflux ABC transporter, permease protein no 0.52
    8 GFF1836 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) no 0.51
    9 GFF3073 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.49
    10 GFF1653 Transcriptional regulator, AcrR family no 0.49
    11 GFF5177 hypothetical protein no 0.49
    12 GFF5944 Adenylosuccinate lyase (EC 4.3.2.2) no 0.48
    13 GFF2118 hypothetical protein no 0.47
    14 GFF2727 Outer membrane protein romA no 0.47
    15 GFF4504 FIG00953527: hypothetical protein no 0.47
    16 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.32 0.47
    17 GFF2716 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) 0.71 0.47
    18 GFF6857 hypothetical protein no 0.46
    19 GFF7069 Transcriptional regulator no 0.46
    20 GFF3113 Methionine ABC transporter permease protein no 0.46

    Or look for negative cofitness