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  • Top cofit genes for PS417_13850 from Pseudomonas simiae WCS417

    2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data)
    Original annotation: acyl-CoA dehydrogenase
    SEED: Butyryl-CoA dehydrogenase (EC 1.3.99.2)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13180 AraC family transcriptional regulator 0.92 0.52
    2 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.95 0.38
    3 PS417_21070 aconitate hydratase 0.58 0.28
    4 PS417_17545 2-oxoisovalerate dehydrogenase 0.95 0.28
    5 PS417_17565 branched-chain amino acid aminotransferase 0.54 0.27
    6 PS417_17560 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) 0.84 0.26
    7 PS417_13855 acetyl-CoA acetyltransferase 0.96 0.25
    8 PS417_21065 3-methylitaconate isomerase 0.57 0.20
    9 PS417_22520 histidine kinase 0.25 0.18
    10 PS417_11430 EamA 0.14 0.17
    11 PS417_10535 hypothetical protein no 0.16
    12 PS417_06630 diguanylate phosphodiesterase no 0.16
    13 PS417_09485 LysR family transcriptional regulator no 0.16
    14 PS417_26360 MFS transporter 0.26 0.16
    15 PS417_10765 hypothetical protein no 0.15
    16 PS417_16570 isocitrate lyase 0.40 0.15
    17 PS417_24155 ATP-binding protein no 0.15
    18 PS417_21000 CrfX protein 0.51 0.15
    19 PS417_05825 cytochrome D ubiquinol oxidase subunit II 0.51 0.15
    20 PS417_26145 hypothetical protein no 0.15

    Or look for negative cofitness