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  • Top cofit genes for PS417_13800 from Pseudomonas simiae WCS417

    4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
    SEED: Polymyxin resistance protein PmrJ, predicted deacetylase
    KEGG: undecaprenyl phosphate-alpha-L-ara4FN deformylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase 0.97 0.83
    2 PS417_13820 UDP-glucose 6-dehydrogenase 0.96 0.82
    3 PS417_13805 4-amino-4-deoxy-L-arabinose transferase 0.96 0.80
    4 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.96 0.79
    5 PS417_24835 hypothetical protein 0.93 0.66
    6 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase 0.83 0.64
    7 PS417_04275 hypothetical protein 0.89 0.63
    8 PS417_21515 transcriptional regulator 0.78 0.61
    9 PS417_22780 XRE family transcriptional regulator 0.79 0.56
    10 PS417_22850 virulence factor family protein 0.42 0.48
    11 PS417_25645 peptidase M23 no 0.48
    12 PS417_22775 histidine kinase 0.77 0.47
    13 PS417_15380 hypothetical protein no 0.46
    14 PS417_00335 cytochrome B561 no 0.46
    15 PS417_25650 anhydro-N-acetylmuramic acid kinase 0.86 0.45
    16 PS417_27245 aminotransferase DegT 0.96 0.45
    17 PS417_14960 ATPase 0.48 0.45
    18 PS417_00305 cytochrome oxidase subunit I no 0.45
    19 PS417_07620 beta-hexosaminidase 0.88 0.43
    20 PS417_21510 histidine kinase 0.88 0.42

    Or look for negative cofitness