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  • Top cofit genes for GFF2701 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Transcriptional regulatory protein YciT
    SEED: Transcriptional regulatory protein YciT

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1756 DNA recombination and repair protein RecF 0.53 0.61
    2 GFF4390 Recombination protein RecR 0.66 0.61
    3 GFF1032 DNA polymerase III psi subunit (EC 2.7.7.7) no 0.57
    4 GFF2991 Tyrosine recombinase XerD no 0.56
    5 GFF2989 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.39 0.56
    6 GFF4449 Fimbriae-like adhesin FimI no 0.55
    7 GFF2216 DNA polymerase I (EC 2.7.7.7) no 0.55
    8 GFF845 Ascorbate utilization transcriptional regulator UlaR, HTH-type no 0.53
    9 GFF2496 Transcriptional regulator, GntR family no 0.51
    10 GFF158 Fructose repressor FruR, LacI family no 0.50
    11 GFF1429 Excinuclease ABC subunit A 0.46 0.50
    12 GFF1750 GTPase and tRNA-U34 5-formylation enzyme TrmE no 0.49
    13 GFF4773 DNA mismatch repair protein MutS no 0.49
    14 GFF3490 Exodeoxyribonuclease III (EC 3.1.11.2) no 0.49
    15 GFF2473 DNA recombination and repair protein RecO 0.47 0.48
    16 GFF241 ATP-dependent DNA helicase UvrD/PcrA 0.27 0.48
    17 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.18 0.48
    18 GFF1081 UPF0246 protein YaaA 0.46 0.48
    19 GFF4852 Serine transporter no 0.47
    20 GFF3759 ABC transporter, periplasmic substrate-binding protein no 0.47

    Or look for negative cofitness