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  • Top cofit genes for PS417_13770 from Pseudomonas simiae WCS417

    major facilitator transporter
    SEED: Multidrug resistance transporter, Bcr/CflA family
    KEGG: MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase no 0.24
    2 PS417_11845 RpiR family transcriptional regulator no 0.23
    3 PS417_17785 4-amino-4-deoxy-L-arabinose transferase no 0.21
    4 PS417_07010 pseudouridine synthase no 0.20
    5 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase no 0.20
    6 PS417_02125 cobalamin biosynthesis protein CobQ 0.12 0.20
    7 PS417_24810 aldehyde dehydrogenase no 0.20
    8 PS417_13820 UDP-glucose 6-dehydrogenase no 0.19
    9 PS417_22795 exclusion suppressor FxsA no 0.19
    10 PS417_24750 3-methyladenine DNA glycosylase no 0.19
    11 PS417_23770 exodeoxyribonuclease V subunit alpha no 0.18
    12 PS417_15390 hypothetical protein no 0.18
    13 PS417_15085 ATPase AAA no 0.18
    14 PS417_12120 IclR family transcriptional regulator no 0.18
    15 PS417_22480 ferritin 0.53 0.18
    16 PS417_13805 4-amino-4-deoxy-L-arabinose transferase no 0.18
    17 PS417_13785 hypothetical protein no 0.18
    18 PS417_07495 ATPase AAA no 0.18
    19 PS417_23800 ketol-acid reductoisomerase no 0.17
    20 PS417_15090 hypothetical protein no 0.17

    Or look for negative cofitness