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  • Top cofit genes for GFF2699 from Variovorax sp. SCN45

    4Fe-4S ferredoxin, iron-sulfur binding
    SEED: 4Fe-4S ferredoxin, iron-sulfur binding

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3886 Putative transmembrane protein no 0.64
    2 GFF4432 Two-component system response regulator protein no 0.63
    3 GFF2155 Signal transduction histidine kinase CheA no 0.63
    4 GFF5415 Type IV fimbrial biogenesis protein PilV no 0.62
    5 GFF5416 Type IV fimbrial biogenesis protein PilW no 0.61
    6 GFF2602 no description no 0.60
    7 GFF993 Type IV pilus biogenesis protein PilF no 0.60
    8 GFF730 Class A beta-lactamase (EC 3.5.2.6) no 0.59
    9 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB no 0.59
    10 GFF5319 Type IV pilus biogenesis protein PilM no 0.59
    11 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) no 0.59
    12 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.59
    13 GFF5144 no description no 0.59
    14 GFF2509 Type IV fimbrial assembly protein PilC no 0.59
    15 GFF5417 hypothetical protein no 0.58
    16 GFF5419 Type IV pilus biogenesis protein PilE no 0.58
    17 GFF2151 twitching motility protein PilG no 0.58
    18 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.58
    19 GFF5322 Type IV pilus biogenesis protein PilP no 0.58
    20 GFF5414 hypothetical protein no 0.58

    Or look for negative cofitness