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  • Top cofit genes for GFF2683 from Variovorax sp. SCN45

    Protein containing domains DUF404, DUF407
    SEED: Protein containing domains DUF404, DUF407

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) 0.23 0.81
    2 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.75
    3 GFF7322 hypothetical protein no 0.75
    4 GFF2682 Protein containing domains DUF403 0.93 0.73
    5 GFF5409 FIG00576366: hypothetical protein no 0.70
    6 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.70
    7 GFF7375 Arginine:pyruvate transaminase no 0.70
    8 GFF6635 FIG00441227: hypothetical protein 0.49 0.69
    9 GFF6278 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) 0.36 0.69
    10 GFF1268 FIG022199: FAD-binding protein no 0.68
    11 GFF7374 FIG00984748: hypothetical protein no 0.68
    12 GFF6125 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.24 0.67
    13 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.67
    14 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.66
    15 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.66
    16 GFF7295 HPr kinase/phosphorylase 0.59 0.65
    17 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.64
    18 GFF4619 Altronate dehydratase (EC 4.2.1.7) no 0.64
    19 GFF5668 Uncharacterized MFS-type transporter no 0.64
    20 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.64

    Or look for negative cofitness