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  • Top cofit genes for GFF2678 from Variovorax sp. SCN45

    Glycerol-3-phosphate regulon repressor GlpR
    SEED: Glycerol-3-phosphate regulon repressor, DeoR family
    KEGG: DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1691 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake 0.75 0.60
    2 GFF5790 putative membrane protein no 0.52
    3 GFF4147 hypothetical protein no 0.51
    4 GFF63 Putative glycosyltransferase no 0.50
    5 GFF358 hypothetical protein no 0.50
    6 GFF7148 D-amino-acid oxidase (EC 1.4.3.3) no 0.49
    7 GFF3792 no description no 0.47
    8 GFF3135 no description no 0.46
    9 GFF2626 major facilitator superfamily MFS_1 no 0.46
    10 GFF1420 Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8) no 0.45
    11 GFF6824 Pyruvate:Oxaloacetate transcarboxylase domain protein no 0.45
    12 GFF4716 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.45
    13 GFF2037 Acetylpolyamine aminohydrolase no 0.45
    14 GFF3491 Ser/Thr protein phosphatase family protein no 0.45
    15 GFF5243 General secretion pathway protein H no 0.45
    16 GFF1592 Response regulator/GGDEF/EAL domain protein no 0.45
    17 GFF5662 no description no 0.44
    18 GFF6307 hypothetical protein no 0.44
    19 GFF5601 Predicted hydrolase of the alpha/beta-hydrolase fold no 0.43
    20 GFF5308 Epoxide hydrolase (EC 3.3.2.9) no 0.43

    Or look for negative cofitness