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  • Top cofit genes for GFF2672 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein
    SEED: ABC transporter, ATP-binding protein
    KEGG: antibiotic transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3441 Hypothetical protein VC0266 (sugar utilization related?) no 0.63
    2 GFF5009 hypothetical protein no 0.59
    3 GFF636 Urea ABC transporter, substrate-binding protein UrtA no 0.58
    4 GFF5401 2-keto-3-deoxy-L-fuconate dehydrogenase no 0.53
    5 GFF6608 hypothetical protein no 0.53
    6 GFF6335 no description no 0.52
    7 GFF5356 Aldose 1-epimerase no 0.52
    8 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.52
    9 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.51
    10 GFF4647 no description no 0.51
    11 GFF7386 no description no 0.51
    12 GFF1907 Transcriptional regulator, AraC family no 0.51
    13 GFF5605 D-xylose ABC transporter, ATP-binding protein XylG no 0.51
    14 GFF4150 Salicylate hydroxylase (EC 1.14.13.1) no 0.51
    15 GFF2019 FIG00976956: hypothetical protein no 0.50
    16 GFF5604 D-xylose ABC transporter, permease protein XylH no 0.50
    17 GFF768 Trehalose synthase (EC 5.4.99.16) no 0.50
    18 GFF1939 hypothetical protein no 0.50
    19 GFF1074 no description no 0.49
    20 GFF6800 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.49

    Or look for negative cofitness