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  • Top cofit genes for GFF2665 from Variovorax sp. SCN45

    FIG001454: Transglutaminase-like enzymes, putative cysteine proteases
    SEED: FIG001454: Transglutaminase-like enzymes, putative cysteine proteases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2713 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.64
    2 GFF5981 COGs COG3558 no 0.61
    3 GFF1713 no description no 0.60
    4 GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain no 0.59
    5 GFF5968 no description no 0.58
    6 GFF1669 hypothetical protein no 0.56
    7 GFF3781 Transcriptional regulator, AcrR family no 0.56
    8 GFF1923 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.56
    9 GFF943 Intracellular PHB depolymerase no 0.53
    10 GFF2491 Threonine-synthase-like protein 3 no 0.53
    11 GFF5589 Methionine aminopeptidase (EC 3.4.11.18) no 0.52
    12 GFF1394 no description no 0.52
    13 GFF3954 Similar to cobalamin biosynthesis protein CbiB no 0.51
    14 GFF1561 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.51
    15 GFF2762 Glutamine ABC transporter, substrate-binding protein GlnH no 0.50
    16 GFF7135 FIG00977464: hypothetical protein no 0.50
    17 GFF2784 Peptidase, M20/M25/M40 family no 0.50
    18 GFF5095 hypothetical protein no 0.49
    19 GFF3502 hypothetical protein no 0.49
    20 GFF966 Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) no 0.49

    Or look for negative cofitness