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  • Top cofit genes for GFF2665 from Sphingobium sp. HT1-2

    tRNA pseudouridine(38-40) synthase (EC 5.4.99.12)
    SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase A

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF975 Iron-sulfur cluster regulator IscR no 0.82
    2 GFF2307 hypothetical protein no 0.78
    3 GFF4543 TonB-dependent receptor no 0.73
    4 GFF5172 group 1 glycosyl transferase no 0.71
    5 GFF4819 amylo-alpha-1,6-glucosidase no 0.71
    6 GFF3203 hypothetical protein no 0.71
    7 GFF4916 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) no 0.71
    8 GFF2387 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.44 0.70
    9 GFF2884 FIG037995: Hypothetical protein no 0.70
    10 GFF3436 Fosmidomycin resistance protein no 0.70
    11 GFF3120 RecA protein 0.71 0.70
    12 GFF3772 D-lactate dehydrogenase (EC 1.1.1.28) no 0.69
    13 GFF113 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake no 0.69
    14 GFF1165 hypothetical protein no 0.69
    15 GFF3184 Acid-resistant locus arl7 (Fragment) no 0.68
    16 GFF2752 hypothetical protein no 0.68
    17 GFF2754 hypothetical protein no 0.68
    18 GFF2169 hypothetical protein no 0.67
    19 GFF2436 hypothetical protein no 0.67
    20 GFF3170 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.67

    Or look for negative cofitness