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  • Top cofit genes for PS417_13580 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06905 alcohol dehydrogenase no 0.19
    2 PS417_11345 membrane protein no 0.18
    3 PS417_02820 urea ABC transporter ATP-binding protein no 0.17
    4 PS417_13690 chemotaxis protein no 0.17
    5 PS417_25355 AraC family transcriptional regulator no 0.17
    6 PS417_05125 sugar ABC transporter substrate-binding protein no 0.16
    7 PS417_27930 type VI secretion protein no 0.16
    8 PS417_00775 hypothetical protein no 0.16
    9 PS417_10860 flagellar basal body rod protein FlgG no 0.16
    10 PS417_06055 pilin assembly protein no 0.16
    11 PS417_22855 ssDNA exonuclease RecJ no 0.16
    12 PS417_09750 amino acid ABC transporter substrate-binding protein no 0.15
    13 PS417_01890 TetR family transcriptional regulator no 0.15
    14 PS417_26765 membrane protein no 0.15
    15 PS417_25290 hypothetical protein no 0.15
    16 PS417_05620 alkyl hydroperoxide reductase no 0.15
    17 PS417_19060 NADPH:quinone oxidoreductase no 0.15
    18 PS417_11565 ABC transporter permease 0.20 0.15
    19 PS417_17935 endoribonuclease L-PSP no 0.15
    20 PS417_11700 ligand-gated channel no 0.15

    Or look for negative cofitness