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  • Top cofit genes for PS417_01355 from Pseudomonas simiae WCS417

    membrane protein
    SEED: Outer membrane porin, OprD family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25320 dTDP-4-dehydrorhamnose reductase no 0.66
    2 PS417_23830 hypothetical protein 0.31 0.61
    3 PS417_22700 RNA polymerase subunit sigma-24 no 0.52
    4 PS417_00180 tryptophan synthase subunit alpha 0.29 0.45
    5 PS417_12395 aminopeptidase N no 0.45
    6 PS417_22500 porin 0.24 0.42
    7 PS417_21125 phosphoadenosine phosphosulfate reductase 0.29 0.41
    8 PS417_05885 potassium transporter Kup 0.60 0.39
    9 PS417_14480 glycogen synthase 0.63 0.39
    10 PS417_20790 adenine phosphoribosyltransferase no 0.38
    11 PS417_00185 tryptophan synthase subunit beta no 0.37
    12 PS417_00245 oligopeptidase A 0.38 0.36
    13 PS417_01340 agmatine deiminase no 0.36
    14 PS417_14835 amidase 0.36 0.35
    15 PS417_04680 porin no 0.35
    16 PS417_19945 MarR family transcriptional regulator no 0.35
    17 PS417_10580 glutamine synthetase 0.30 0.35
    18 PS417_26080 TonB-dependent receptor no 0.33
    19 PS417_22715 heme oxygenase no 0.32
    20 PS417_04740 RND transporter 0.42 0.32

    Or look for negative cofitness