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  • Top cofit genes for GFF266 from Variovorax sp. SCN45

    RND efflux system, inner membrane transporter
    SEED: RND multidrug efflux transporter; Acriflavin resistance protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1300 hypothetical protein no 0.65
    2 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.43 0.61
    3 GFF5687 FIG01027591: hypothetical protein no 0.60
    4 GFF3877 Uncharacterized chaperone protein YegD no 0.59
    5 GFF5855 T1SS secreted agglutinin RTX no 0.58
    6 GFF248 Cell division protein FtsH (EC 3.4.24.-) no 0.58
    7 GFF1186 Ferrichrome-iron receptor no 0.56
    8 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.55
    9 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.55
    10 GFF4801 DedA protein no 0.55
    11 GFF3130 hypothetical protein no 0.54
    12 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.54
    13 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.54
    14 GFF6392 hypothetical protein no 0.53
    15 GFF5018 Uncharacterized protein YpeB no 0.53
    16 GFF1509 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.53
    17 GFF2163 hypothetical protein no 0.53
    18 GFF2830 Uncharacterized protein CC_3061 no 0.52
    19 GFF5609 Transcriptional regulator, LuxR family no 0.52
    20 GFF493 RND efflux system, inner membrane transporter no 0.52

    Or look for negative cofitness