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  • Top cofit genes for PS417_13550 from Pseudomonas simiae WCS417

    amino acid ABC transporter substrate-binding protein
    SEED: Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1)
    KEGG: polar amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13880 histidine kinase no 0.22
    2 PS417_27065 hypothetical protein no 0.21
    3 PS417_12830 LysR family transcriptional regulator no 0.20
    4 PS417_08020 LysR family transcriptional regulator 0.35 0.19
    5 PS417_01435 hypothetical protein no 0.19
    6 PS417_16560 GNAT family acetyltransferase no 0.19
    7 PS417_23150 Cro/Cl family transcriptional regulator no 0.19
    8 PS417_15320 type VI secretion protein no 0.18
    9 PS417_06350 stationary phase survival protein SurE no 0.18
    10 PS417_00485 ABC transporter permease no 0.17
    11 PS417_15275 type VI secretion protein no 0.17
    12 PS417_14800 diguanylate cyclase no 0.17
    13 PS417_12400 oxidoreductase no 0.17
    14 PS417_18440 hypothetical protein no 0.17
    15 PS417_24780 peptidase C13 no 0.17
    16 PS417_14745 hypothetical protein no 0.16
    17 PS417_27240 hypothetical protein no 0.16
    18 PS417_10210 hypothetical protein no 0.16
    19 PS417_26570 hemolysin III no 0.16
    20 PS417_17630 RNA polymerase sigma factor no 0.16

    Or look for negative cofitness