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  • Top cofit genes for GFF2656 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Fumarate and nitrate reduction regulatory protein
    SEED: Fumarate and nitrate reduction regulatory protein
    KEGG: CRP/FNR family transcriptional regulator, anaerobic regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3228 Phage tail fibers no 0.65
    2 GFF2481 hypothetical protein no 0.61
    3 GFF3254 Methylglyoxal synthase (EC 4.2.3.3) no 0.60
    4 GFF334 Mg(2+) transport ATPase, P-type (EC 3.6.3.2) 0.69 0.59
    5 GFF818 Phage tail fiber protein no 0.59
    6 GFF3660 Pyruvate formate-lyase (EC 2.3.1.54) 0.94 0.59
    7 GFF3248 Outer membrane protein A precursor 0.41 0.58
    8 GFF817 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) no 0.58
    9 GFF871 Putative membrane protein 0.40 0.58
    10 GFF799 FIG01045807: hypothetical protein no 0.57
    11 GFF3231 Gifsy-2 prophage protein no 0.56
    12 GFF3835 Uncharacterized HTH-type transcriptional regulator YegW 0.31 0.55
    13 GFF4649 Cyd operon protein YbgE no 0.54
    14 GFF3227 Phage tail fiber protein no 0.54
    15 GFF813 Attachment invasion locus protein precursor no 0.52
    16 GFF811 Phage tail length tape-measure protein 1 no 0.52
    17 GFF2169 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.30 0.52
    18 GFF2299 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) no 0.52
    19 GFF801 FIG01047026: hypothetical protein no 0.52
    20 GFF1864 Polymyxin resistance protein PmrM 0.34 0.52

    Or look for negative cofitness