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  • Top cofit genes for GFF2655 from Variovorax sp. SCN45

    Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit
    SEED: Transport ATP-binding protein CydD
    KEGG: ATP-binding cassette, subfamily C, bacterial

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6274 Ketosteroid isomerase-related protein no 0.54
    2 GFF4853 Transcriptional regulator, LysR family no 0.53
    3 GFF6747 Glycosyl transferase, family 2 no 0.51
    4 GFF68 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.33 0.51
    5 GFF7352 1,2-phenylacetyl-CoA epoxidase, subunit D (EC 1.14.13.149) no 0.50
    6 GFF65 hypothetical protein no 0.50
    7 GFF78 Cytochrome c family protein no 0.49
    8 GFF3013 KEGG: type VI secretion system secreted protein Hcp no 0.49
    9 GFF4532 hypothetical protein no 0.48
    10 GFF876 hypothetical protein no 0.48
    11 GFF1537 FIG01127817: hypothetical protein no 0.48
    12 GFF6740 hypothetical protein no 0.48
    13 GFF4404 Mobile element protein no 0.48
    14 GFF5686 FIG01027227: hypothetical protein no 0.46
    15 GFF5413 Mobile element protein no 0.46
    16 GFF1435 BUG/TctC family periplasmic protein no 0.46
    17 GFF6576 Conjugative transfer protein TrbE no 0.46
    18 GFF170 Two-component system sensor histidine kinase/response regulator hybrid no 0.45
    19 GFF5227 Putative diheme cytochrome c-553 no 0.45
    20 GFF4902 hypothetical protein no 0.45

    Or look for negative cofitness