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  • Top cofit genes for GFF2648 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4632 Glycosyl transferase, family 2 no 0.53
    2 GFF3340 FIG00932469: hypothetical protein no 0.53
    3 GFF7336 Alkanesulfonate utilization operon LysR-family regulator Cbl no 0.50
    4 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily 0.18 0.50
    5 GFF214 Putative transmembrane protein 0.32 0.49
    6 GFF3075 Surface antigen no 0.49
    7 GFF6741 UPF0053 inner membrane protein YoaE 0.30 0.48
    8 GFF4085 Transcriptional regulator, LysR family no 0.48
    9 GFF6085 Transcriptional regulator, AcrR family 0.33 0.48
    10 GFF5005 cytidine/deoxycytidylate deaminase family protein no 0.48
    11 GFF3609 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    12 GFF1611 no description no 0.47
    13 GFF3173 Transcriptional regulator, IclR family no 0.47
    14 GFF1788 hypothetical protein no 0.46
    15 GFF6666 Transcriptional regulator protein no 0.46
    16 GFF1053 no description no 0.46
    17 GFF1490 Transcriptional regulator, LysR family no 0.45
    18 GFF754 FIG00975093: hypothetical protein no 0.45
    19 GFF2669 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) no 0.45
    20 GFF2680 Protein of unknown function DUF1058 no 0.45

    Or look for negative cofitness