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  • Top cofit genes for GFF2645 from Variovorax sp. SCN45

    Acyl dehydratase
    SEED: Acyl dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2084 Phosphatidate cytidylyltransferase (EC 2.7.7.41) no 0.55
    2 GFF646 no description no 0.54
    3 GFF5107 Transcriptional regulator, LysR family no 0.54
    4 GFF2263 putative membrane protein no 0.53
    5 GFF1014 Arylesterase precursor (EC 3.1.1.2) no 0.53
    6 GFF2088 Putative lipase in cluster with Phosphatidate cytidylyltransferase no 0.53
    7 GFF3420 Transcriptional regulator, AcrR family no 0.52
    8 GFF4671 putative membrane protein no 0.51
    9 GFF4582 TRAP-type C4-dicarboxylate transport system, small permease component no 0.50
    10 GFF5043 ABC transporter, permease protein (cluster 9, phospholipid) no 0.49
    11 GFF4020 Arsenic resistance protein ArsH no 0.48
    12 GFF5193 Galactofuranose ABC transporter, substrate-binding protein no 0.48
    13 GFF306 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.46
    14 GFF6438 hypothetical protein no 0.46
    15 GFF4423 Conjugative transfer protein TrbI no 0.46
    16 GFF7100 similar to protocatechuate 4,5-dioxygenase beta chain no 0.46
    17 GFF3481 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.46
    18 GFF5480 no description no 0.46
    19 GFF6350 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.46
    20 GFF6939 ABC-type antimicrobial peptide transport system, permease component no 0.46

    Or look for negative cofitness